# primary-chromosome genome (chr1-22, X, Y)	3088269832
# cCRE union bases	627448729	20.32% of genome
te_group	te_bases	pct_genome	te_bases_in_cCRE	pct_of_group_in_cCRE	pct_of_cCRE_bases
DNA	102416871	3.32	21730773	21.22	3.46
LINE	641272230	20.76	76475805	11.93	12.19
LTR	268135790	8.68	62713594	23.39	10.00
RC	432360	0.01	95661	22.13	0.02
Retroposon	4197121	0.14	1175486	28.01	0.19
SINE	392776945	12.72	59291186	15.10	9.45
all	1408830169	45.62	221387855	15.71	35.28
family:Alu	307185647	9.95	37351249	12.16	5.95
family:ERV1	84504302	2.74	20868881	24.70	3.33
family:ERVK	8935675	0.29	2113044	23.65	0.34
family:ERVL	57089965	1.85	13802260	24.18	2.20
family:ERVL-MaLR	110951753	3.59	24215969	21.83	3.86
family:L1	520814915	16.86	47102048	9.04	7.51
family:L2	103499507	3.35	24796365	23.96	3.95
family:MIR	84289117	2.73	21363196	25.35	3.40
ccre_type	n	n_any_TE_overlap	pct_any	n_half_or_more_TE	pct_half
CA	245985	156514	63.6	112642	45.8
CA-CTCF	126034	75766	60.1	54940	43.6
CA-H3K4me3	79246	46325	58.5	35327	44.6
CA-TF	26102	17772	68.1	12856	49.3
PLS	47532	8396	17.7	3746	7.9
TF	105286	79260	75.3	61425	58.3
all	2348854	1254031	53.4	830849	35.4
dELS	1469205	768321	52.3	488858	33.3
pELS	249464	101677	40.8	61055	24.5